Chromosome pair finding using intensity profiles of M-FISH images

Authors

Ranzivelle Marianne L. Roxas National Institute of Physics, University of the Philippines Diliman
Maricor N. Soriano National Institute of Physics, University of the Philippines Diliman
Caesar A. Saloma National Institute of Physics, University of the Philippines Diliman

Abstract

We present a technique in automatically finding the chromosome pairs in M-FISH images. The intensity of pixels for each dye was obtained. These intensity profiles were averaged for each chromosome and used as signature for finding chromosome pairs. Each chromosome pair was then tagged with a pseudo-color. Comparing the pseudocolored image to an actual karyotype yields 25±13% error.

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Issue

2003: Proceedings of the 21st Samahang Pisika ng Pilipinas Physics Congress

Article ID

SPP-2003-PA-17

Section

Poster Session PA

Published

2003-10-22

How to Cite

[1]

RML Roxas, MN Soriano, and CA Saloma, Chromosome pair finding using intensity profiles of M-FISH images, Proceedings of the Samahang Pisika ng Pilipinas 21, SPP-2003-PA-17 (2003). URL: https://proceedings.spp-online.org/article/view/SPP-2003-PA-17.